Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Gm9229-201ENSMUST00000222777 126 ntBASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col16a1Q8BLX7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Gm43630-201ENSMUST00000201550 776 ntBASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Gm9797-201ENSMUST00000052902 613 ntBASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Col16a1Q8BLX7 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm28760-201ENSMUST00000185995 736 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col16a1Q8BLX7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms