Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SynbQ8BI41 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.45□□□□□ -0.1
SynbQ8BI41 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.45□□□□□ -0.1
SynbQ8BI41 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SynbQ8BI41 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SynbQ8BI41 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SynbQ8BI41 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.44□□□□□ -0.1
SynbQ8BI41 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.44□□□□□ -0.1
SynbQ8BI41 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SynbQ8BI41 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.44□□□□□ -0.1
SynbQ8BI41 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Gm18489-201ENSMUST00000172565 551 ntBASIC14.43□□□□□ -0.1
SynbQ8BI41 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.43□□□□□ -0.1
SynbQ8BI41 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.43□□□□□ -0.1
SynbQ8BI41 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.43□□□□□ -0.1
SynbQ8BI41 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SynbQ8BI41 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SynbQ8BI41 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Gm14057-201ENSMUST00000120631 482 ntBASIC14.42□□□□□ -0.1
SynbQ8BI41 Mir1895-201ENSMUST00000122615 79 ntBASIC14.42□□□□□ -0.1
SynbQ8BI41 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.42□□□□□ -0.1
SynbQ8BI41 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms