Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4dQ8BGV9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4dQ8BGV9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm16026-204ENSMUST00000162652 683 ntBASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms