Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Gm21854-201ENSMUST00000179901 471 ntBASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trnp1Q80ZI1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Gm6266-201ENSMUST00000203844 806 ntBASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trnp1Q80ZI1 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Gm18624-201ENSMUST00000220966 658 ntBASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trnp1Q80ZI1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trnp1Q80ZI1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trnp1Q80ZI1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trnp1Q80ZI1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Gm15824-201ENSMUST00000119516 955 ntBASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Gm11918-201ENSMUST00000121660 179 ntBASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Mir1938-201ENSMUST00000158746 100 ntBASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.89■□□□□ 0.29
Trnp1Q80ZI1 Gm10766-202ENSMUST00000194123 606 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms