Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm21854-201ENSMUST00000179901 471 ntBASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Dupd1-202ENSMUST00000224735 548 ntBASIC12.61□□□□□ -0.39
Ttc28Q80XJ3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.6□□□□□ -0.39
Ttc28Q80XJ3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm45331-201ENSMUST00000209868 554 ntBASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm5479-201ENSMUST00000160578 435 ntBASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms