Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm5866-201ENSMUST00000177881 973 ntBASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm5745-201ENSMUST00000183748 313 ntBASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm27920-201ENSMUST00000183953 96 ntBASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Mir8102-201ENSMUST00000184148 139 ntBASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Gm28630-201ENSMUST00000187806 498 ntBASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp6nlQ80XC3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Usp6nlQ80XC3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp6nlQ80XC3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Gm18049-201ENSMUST00000208909 581 ntBASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Gm6888-201ENSMUST00000221983 706 ntBASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp6nlQ80XC3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm25144-201ENSMUST00000179561 110 ntBASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm25352-201ENSMUST00000179815 110 ntBASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Usp6nlQ80XC3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.62■□□□□ 0.25
Usp6nlQ80XC3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms