Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.43□□□□□ -0.1
Vrk1Q80X41 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.42□□□□□ -0.1
Vrk1Q80X41 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.42□□□□□ -0.1
Vrk1Q80X41 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vrk1Q80X41 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gm20949-201ENSMUST00000206478 952 ntBASIC14.41□□□□□ -0.1
Vrk1Q80X41 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vrk1Q80X41 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Gm22175-201ENSMUST00000175007 78 ntBASIC14.4□□□□□ -0.1
Vrk1Q80X41 Gm7774-201ENSMUST00000200064 533 ntBASIC14.4□□□□□ -0.1
Vrk1Q80X41 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.4□□□□□ -0.1
Vrk1Q80X41 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.4□□□□□ -0.1
Vrk1Q80X41 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vrk1Q80X41 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms