Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.07■□□□□ 0
Rpp38Q80UU2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.07■□□□□ 0
Rpp38Q80UU2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp38Q80UU2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.07■□□□□ 0
Rpp38Q80UU2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.06■□□□□ 0
Rpp38Q80UU2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.06■□□□□ 0
Rpp38Q80UU2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.06■□□□□ 0
Rpp38Q80UU2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.06■□□□□ 0
Rpp38Q80UU2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.06■□□□□ 0
Rpp38Q80UU2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp38Q80UU2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rpp38Q80UU2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rpp38Q80UU2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpp38Q80UU2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Rpp38Q80UU2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.05■□□□□ -0
Rpp38Q80UU2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Efs-202ENSMUST00000227037 2540 ntBASIC15.05■□□□□ -0
Rpp38Q80UU2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp38Q80UU2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp38Q80UU2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Rpp38Q80UU2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.04■□□□□ -0
Rpp38Q80UU2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms