Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Gm12008-201ENSMUST00000117791 755 ntBASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scaf4Q6PFF0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scaf4Q6PFF0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scaf4Q6PFF0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms