Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd4Q6PDQ2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Mir125a-201ENSMUST00000083545 68 ntBASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chd4Q6PDQ2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Gm9229-201ENSMUST00000222777 126 ntBASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Syt7-205ENSMUST00000224135 1557 ntBASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.46■□□□□ 0.71
Chd4Q6PDQ2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gm9522-201ENSMUST00000182394 926 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gm12859-201ENSMUST00000117834 427 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gm27838-201ENSMUST00000184829 128 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 AA619741-201ENSMUST00000195095 646 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Syt7-204ENSMUST00000223586 1344 ntBASIC19.45■□□□□ 0.7
Chd4Q6PDQ2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms