Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ParpbpQ6IRT3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ParpbpQ6IRT3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ParpbpQ6IRT3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gm14722-201ENSMUST00000118943 689 ntBASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ParpbpQ6IRT3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm5682-201ENSMUST00000173402 505 ntBASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm18733-201ENSMUST00000173950 856 ntBASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm37153-201ENSMUST00000193637 231 ntBASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms