Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Celf4-206ENSMUST00000224553 1729 ntBASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Krt39Q6IFX4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Carlr-201ENSMUST00000181515 2574 ntBASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Krt39Q6IFX4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Krt39Q6IFX4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Krt39Q6IFX4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Krt39Q6IFX4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Krt39Q6IFX4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Krt39Q6IFX4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Gm15358-201ENSMUST00000119249 520 ntBASIC16.7■□□□□ 0.26
Krt39Q6IFX4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt39Q6IFX4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt39Q6IFX4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms