Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.09■□□□□ 0.65
Clcn1Q64347 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.09■□□□□ 0.65
Clcn1Q64347 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.09■□□□□ 0.65
Clcn1Q64347 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn1Q64347 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Clcn1Q64347 Mir6977-201ENSMUST00000184960 64 ntBASIC19.09■□□□□ 0.65
Clcn1Q64347 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.09■□□□□ 0.65
Clcn1Q64347 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.08■□□□□ 0.65
Clcn1Q64347 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn1Q64347 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn1Q64347 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn1Q64347 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn1Q64347 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn1Q64347 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Clcn1Q64347 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Gm17837-201ENSMUST00000186435 985 ntBASIC19.08■□□□□ 0.64
Clcn1Q64347 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Gm2423-201ENSMUST00000074863 733 ntBASIC19.08■□□□□ 0.64
Clcn1Q64347 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn1Q64347 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clcn1Q64347 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Clcn1Q64347 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.07■□□□□ 0.64
Clcn1Q64347 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Gm16026-204ENSMUST00000162652 683 ntBASIC19.07■□□□□ 0.64
Clcn1Q64347 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.07■□□□□ 0.64
Clcn1Q64347 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clcn1Q64347 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn1Q64347 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Gm15693-201ENSMUST00000120470 637 ntBASIC19.06■□□□□ 0.64
Clcn1Q64347 Gm27989-201ENSMUST00000184721 107 ntBASIC19.06■□□□□ 0.64
Clcn1Q64347 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clcn1Q64347 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clcn1Q64347 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn1Q64347 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms