Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim27Q62158 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Trim27Q62158 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.53■□□□□ 0.56
Trim27Q62158 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim27Q62158 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim27Q62158 Gm18733-201ENSMUST00000173950 856 ntBASIC18.53■□□□□ 0.56
Trim27Q62158 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim27Q62158 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.53■□□□□ 0.56
Trim27Q62158 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim27Q62158 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim27Q62158 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim27Q62158 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim27Q62158 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim27Q62158 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim27Q62158 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Trim27Q62158 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim27Q62158 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim27Q62158 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Trim27Q62158 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Trim27Q62158 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim27Q62158 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim27Q62158 Gm12008-201ENSMUST00000117791 755 ntBASIC18.5■□□□□ 0.55
Trim27Q62158 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Trim27Q62158 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim27Q62158 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.5■□□□□ 0.55
Trim27Q62158 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.5■□□□□ 0.55
Trim27Q62158 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim27Q62158 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim27Q62158 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim27Q62158 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim27Q62158 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
Trim27Q62158 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim27Q62158 Carlr-201ENSMUST00000181515 2574 ntBASIC18.49■□□□□ 0.55
Trim27Q62158 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim27Q62158 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.49■□□□□ 0.55
Trim27Q62158 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms