Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.67□□□□□ -0.38
SspnQ62147 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SspnQ62147 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.67□□□□□ -0.38
SspnQ62147 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SspnQ62147 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.66□□□□□ -0.38
SspnQ62147 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.66□□□□□ -0.38
SspnQ62147 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SspnQ62147 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SspnQ62147 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SspnQ62147 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.66□□□□□ -0.38
SspnQ62147 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.66□□□□□ -0.38
SspnQ62147 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.66□□□□□ -0.38
SspnQ62147 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.66□□□□□ -0.38
SspnQ62147 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
SspnQ62147 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SspnQ62147 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SspnQ62147 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SspnQ62147 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.66□□□□□ -0.38
SspnQ62147 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SspnQ62147 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SspnQ62147 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Gm8097-201ENSMUST00000117903 829 ntBASIC12.65□□□□□ -0.38
SspnQ62147 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.65□□□□□ -0.38
SspnQ62147 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Gm7977-201ENSMUST00000193787 748 ntBASIC12.65□□□□□ -0.38
SspnQ62147 Gm18669-201ENSMUST00000216049 778 ntBASIC12.65□□□□□ -0.38
SspnQ62147 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.65□□□□□ -0.38
SspnQ62147 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SspnQ62147 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.65□□□□□ -0.38
SspnQ62147 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SspnQ62147 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SspnQ62147 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SspnQ62147 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.65□□□□□ -0.39
SspnQ62147 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SspnQ62147 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SspnQ62147 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SspnQ62147 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SspnQ62147 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.64□□□□□ -0.39
SspnQ62147 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SspnQ62147 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SspnQ62147 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SspnQ62147 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SspnQ62147 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.64□□□□□ -0.39
SspnQ62147 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SspnQ62147 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms