Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ClpbQ60649 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Gm27628-201ENSMUST00000184911 107 ntBASIC14.51□□□□□ -0.09
ClpbQ60649 Gm37153-201ENSMUST00000193637 231 ntBASIC14.51□□□□□ -0.09
ClpbQ60649 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.51□□□□□ -0.09
ClpbQ60649 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.51□□□□□ -0.09
ClpbQ60649 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ClpbQ60649 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ClpbQ60649 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ClpbQ60649 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.5□□□□□ -0.09
ClpbQ60649 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ClpbQ60649 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.5□□□□□ -0.09
ClpbQ60649 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.5□□□□□ -0.09
ClpbQ60649 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.5□□□□□ -0.09
ClpbQ60649 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.5□□□□□ -0.09
ClpbQ60649 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClpbQ60649 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.49□□□□□ -0.09
ClpbQ60649 Gm14140-201ENSMUST00000119999 995 ntBASIC14.49□□□□□ -0.09
ClpbQ60649 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.49□□□□□ -0.09
ClpbQ60649 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.49□□□□□ -0.09
ClpbQ60649 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ClpbQ60649 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ClpbQ60649 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.48□□□□□ -0.09
ClpbQ60649 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.48□□□□□ -0.09
ClpbQ60649 Gm14722-201ENSMUST00000118943 689 ntBASIC14.48□□□□□ -0.09
ClpbQ60649 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.48□□□□□ -0.09
ClpbQ60649 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Gm5682-201ENSMUST00000173402 505 ntBASIC14.48□□□□□ -0.09
ClpbQ60649 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.48□□□□□ -0.09
ClpbQ60649 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms