Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm38294-201ENSMUST00000192831 381 ntBASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm2451-201ENSMUST00000199447 999 ntBASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm10290-201ENSMUST00000200451 999 ntBASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Olfr286-202ENSMUST00000205305 969 ntBASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Gm16476-201ENSMUST00000221544 139 ntBASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scaf1Q5U4C3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scaf1Q5U4C3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm7488-201ENSMUST00000117148 684 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm24694-201ENSMUST00000180054 110 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm27663-201ENSMUST00000184839 110 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm7730-201ENSMUST00000212486 454 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms