Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Gm2272-201ENSMUST00000194903 582 ntBASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.12■□□□□ 0.49
Vps54Q5SPW0 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Gm5867-201ENSMUST00000063197 592 ntBASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps54Q5SPW0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Gm43575-201ENSMUST00000196420 516 ntBASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Gm43767-201ENSMUST00000198933 381 ntBASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps54Q5SPW0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm23935-201ENSMUST00000102303 57 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm24270-201ENSMUST00000102326 57 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm24245-201ENSMUST00000157318 57 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Rpph1-201ENSMUST00000175096 319 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps54Q5SPW0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms