Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Trav2Q5R1I9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav2Q5R1I9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Gm5177-201ENSMUST00000183092 997 ntBASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav2Q5R1I9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm23935-201ENSMUST00000102303 57 ntBASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm24270-201ENSMUST00000102326 57 ntBASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm24245-201ENSMUST00000157318 57 ntBASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav2Q5R1I9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.07□□□□□ -0.48
Trav2Q5R1I9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.06□□□□□ -0.48
Trav2Q5R1I9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav2Q5R1I9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.06□□□□□ -0.48
Trav2Q5R1I9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms