Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm17971-201ENSMUST00000190239 806 ntBASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm6089-201ENSMUST00000197666 938 ntBASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.02□□□□□ -0.33
Trav5d-4Q5R1F6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Efs-202ENSMUST00000227037 2540 ntBASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm25990-201ENSMUST00000102440 86 ntBASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm6376-201ENSMUST00000209407 580 ntBASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5d-4Q5R1F6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gm3928-201ENSMUST00000121141 1307 ntBASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav5d-4Q5R1F6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms