Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Gm18195-201ENSMUST00000207604 706 ntBASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf20Q5DTM8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf20Q5DTM8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Gm45167-201ENSMUST00000208007 322 ntBASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf20Q5DTM8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms