Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Gm11594-201ENSMUST00000122313 162 ntBASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Mir8117-201ENSMUST00000184773 107 ntBASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Thap2-203ENSMUST00000218989 527 ntBASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm4Q4VBF2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm4Q4VBF2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm9385-201ENSMUST00000117563 472 ntBASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm4Q4VBF2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm4Q4VBF2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms