Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Gm11779-201ENSMUST00000118541 368 ntBASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Mir8117-201ENSMUST00000184773 107 ntBASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Gm6443-201ENSMUST00000203599 874 ntBASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap2Q3V1H1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap2Q3V1H1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Efs-202ENSMUST00000227037 2540 ntBASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ckap2Q3V1H1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap2Q3V1H1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms