Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf223Q3UV31 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.63□□□□□ -0.07
Rnf223Q3UV31 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf223Q3UV31 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf223Q3UV31 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Gm6973-201ENSMUST00000117080 721 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Gm43474-201ENSMUST00000196415 774 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf223Q3UV31 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm6754-201ENSMUST00000117124 913 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm15483-201ENSMUST00000120338 456 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm28196-201ENSMUST00000187719 640 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm43125-201ENSMUST00000201724 730 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf223Q3UV31 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Gm5312-201ENSMUST00000203728 547 ntBASIC14.6□□□□□ -0.07
Rnf223Q3UV31 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rnf223Q3UV31 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms