Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zfp560Q3URI6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Gm14140-201ENSMUST00000119999 995 ntBASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Gm27300-201ENSMUST00000184085 97 ntBASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Gm27335-201ENSMUST00000184758 97 ntBASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.16■□□□□ 0.02
Zfp560Q3URI6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Gm18206-201ENSMUST00000207027 926 ntBASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Gm5364-201ENSMUST00000216789 889 ntBASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 BC037039-201ENSMUST00000192003 2205 ntBASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zfp560Q3URI6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.14■□□□□ 0.01
Zfp560Q3URI6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zfp560Q3URI6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms