Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm36967-201ENSMUST00000193814 266 ntBASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Gm2559-201ENSMUST00000201323 363 ntBASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Gm10493-201ENSMUST00000097270 612 ntBASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cks1brtQ3UNC9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1brtQ3UNC9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1brtQ3UNC9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1brtQ3UNC9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1brtQ3UNC9 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.9□□□□□ -0.67
Cks1brtQ3UNC9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms