Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Gm5866-201ENSMUST00000177881 973 ntBASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Upf3aQ3ULJ3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upf3aQ3ULJ3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.84■□□□□ 0.13
Upf3aQ3ULJ3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Upf3aQ3ULJ3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.83■□□□□ 0.12
Upf3aQ3ULJ3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms