Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Gm27494-201ENSMUST00000184735 189 ntBASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx6-3Q3UHX8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Chchd1-203ENSMUST00000224633 557 ntBASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkx6-3Q3UHX8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Mir1895-201ENSMUST00000122615 79 ntBASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms