Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lins1Q3U1D0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lins1Q3U1D0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.94■□□□□ 0.46
Lins1Q3U1D0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lins1Q3U1D0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Mir449b-201ENSMUST00000104833 80 ntBASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.92■□□□□ 0.46
Lins1Q3U1D0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.92■□□□□ 0.46
Lins1Q3U1D0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms