Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm13597-201ENSMUST00000121239 375 ntBASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ctdnep1Q3TP92 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctdnep1Q3TP92 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctdnep1Q3TP92 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms