Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Gm2399-201ENSMUST00000104944 225 ntBASIC12.48□□□□□ -0.41
Trim63Q38HM4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.48□□□□□ -0.41
Trim63Q38HM4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.48□□□□□ -0.41
Trim63Q38HM4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim63Q38HM4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.47□□□□□ -0.41
Trim63Q38HM4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Gm40848-201ENSMUST00000221998 324 ntBASIC12.47□□□□□ -0.41
Trim63Q38HM4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim63Q38HM4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms