Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Gm5276-201ENSMUST00000196683 1047 ntBASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 CT010506.4-201ENSMUST00000225457 351 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 AC154462.2-201ENSMUST00000227519 370 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm36858-201ENSMUST00000194501 2391 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm11667-201ENSMUST00000119828 486 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm8810-201ENSMUST00000172895 754 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm7556-201ENSMUST00000201178 1084 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm44551-201ENSMUST00000208804 171 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 CT025551.1-201ENSMUST00000223996 692 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm8546-201ENSMUST00000178288 1264 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm9540-201ENSMUST00000188230 478 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm10752-201ENSMUST00000218348 729 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm5763-201ENSMUST00000155951 1530 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 AC141438.2-201ENSMUST00000215068 271 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 AC122876.1-201ENSMUST00000217619 825 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 AC135114.1-201ENSMUST00000228682 270 ntBASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ush2AQ2QI47 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm15460-201ENSMUST00000118147 391 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm2260-201ENSMUST00000184965 657 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm25732-201ENSMUST00000175168 60 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gstp-ps-201ENSMUST00000195526 631 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm45751-201ENSMUST00000210185 1573 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm5069-202ENSMUST00000192714 1011 ntBASIC7.88□□□□□ -1.15
Ush2AQ2QI47 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms