Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.4□□□□□ -0.26
Chd8Q09XV5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gm8959-201ENSMUST00000213150 571 ntBASIC13.39□□□□□ -0.27
Chd8Q09XV5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.39□□□□□ -0.27
Chd8Q09XV5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.39□□□□□ -0.27
Chd8Q09XV5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Haglr-201ENSMUST00000100000 2085 ntBASIC13.39□□□□□ -0.27
Chd8Q09XV5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chd8Q09XV5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm43818-201ENSMUST00000200605 466 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gm24196-201ENSMUST00000179161 110 ntBASIC13.38□□□□□ -0.27
Chd8Q09XV5 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd8Q09XV5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.37□□□□□ -0.27
Chd8Q09XV5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms