Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GabpaQ00422 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.12■□□□□ 0.33
GabpaQ00422 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.12■□□□□ 0.33
GabpaQ00422 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GabpaQ00422 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.11■□□□□ 0.33
GabpaQ00422 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GabpaQ00422 Celf4-206ENSMUST00000224553 1729 ntBASIC17.11■□□□□ 0.33
GabpaQ00422 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GabpaQ00422 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.11■□□□□ 0.33
GabpaQ00422 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.11■□□□□ 0.33
GabpaQ00422 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.11■□□□□ 0.33
GabpaQ00422 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.11■□□□□ 0.33
GabpaQ00422 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
GabpaQ00422 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GabpaQ00422 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.1■□□□□ 0.33
GabpaQ00422 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GabpaQ00422 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Gm14057-201ENSMUST00000120631 482 ntBASIC17.1■□□□□ 0.33
GabpaQ00422 Gm11543-201ENSMUST00000120758 370 ntBASIC17.1■□□□□ 0.33
GabpaQ00422 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.1■□□□□ 0.33
GabpaQ00422 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Gm20949-201ENSMUST00000206478 952 ntBASIC17.1■□□□□ 0.33
GabpaQ00422 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.1■□□□□ 0.33
GabpaQ00422 Gm5779-201ENSMUST00000218467 910 ntBASIC17.1■□□□□ 0.33
GabpaQ00422 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GabpaQ00422 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GabpaQ00422 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GabpaQ00422 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GabpaQ00422 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GabpaQ00422 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.09■□□□□ 0.33
GabpaQ00422 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
GabpaQ00422 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GabpaQ00422 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GabpaQ00422 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.09■□□□□ 0.33
GabpaQ00422 Gm43767-201ENSMUST00000198933 381 ntBASIC17.09■□□□□ 0.33
GabpaQ00422 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.09■□□□□ 0.33
GabpaQ00422 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GabpaQ00422 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GabpaQ00422 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GabpaQ00422 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GabpaQ00422 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GabpaQ00422 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
GabpaQ00422 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms