Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Gfra1P97785 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.5□□□□□ -0.41
Gfra1P97785 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.5□□□□□ -0.41
Gfra1P97785 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.5□□□□□ -0.41
Gfra1P97785 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gfra1P97785 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gfra1P97785 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gfra1P97785 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gfra1P97785 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
Gfra1P97785 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.49□□□□□ -0.41
Gfra1P97785 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Gfra1P97785 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.49□□□□□ -0.41
Gfra1P97785 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gfra1P97785 Gm14822-201ENSMUST00000122247 291 ntBASIC12.49□□□□□ -0.41
Gfra1P97785 Gm10499-201ENSMUST00000174094 934 ntBASIC12.49□□□□□ -0.41
Gfra1P97785 Gm27301-201ENSMUST00000184012 127 ntBASIC12.49□□□□□ -0.41
Gfra1P97785 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.49□□□□□ -0.41
Gfra1P97785 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gfra1P97785 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gfra1P97785 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gfra1P97785 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Gfra1P97785 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.48□□□□□ -0.41
Gfra1P97785 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Gfra1P97785 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Gm12008-201ENSMUST00000117791 755 ntBASIC12.48□□□□□ -0.41
Gfra1P97785 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.48□□□□□ -0.41
Gfra1P97785 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Gfra1P97785 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Sybu-209ENSMUST00000228639 4113 ntBASIC12.48□□□□□ -0.41
Gfra1P97785 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gfra1P97785 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gfra1P97785 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gfra1P97785 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gfra1P97785 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Gfra1P97785 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.47□□□□□ -0.41
Gfra1P97785 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gfra1P97785 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.47□□□□□ -0.41
Gfra1P97785 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms