Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pkp1P97350 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Pkp1P97350 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pkp1P97350 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Pkp1P97350 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pkp1P97350 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pkp1P97350 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.65■□□□□ 0.42
Pkp1P97350 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Gm43767-201ENSMUST00000198933 381 ntBASIC17.65■□□□□ 0.42
Pkp1P97350 Gm7787-201ENSMUST00000216858 688 ntBASIC17.65■□□□□ 0.42
Pkp1P97350 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.65■□□□□ 0.42
Pkp1P97350 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pkp1P97350 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pkp1P97350 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pkp1P97350 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pkp1P97350 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pkp1P97350 Gm12350-201ENSMUST00000121208 462 ntBASIC17.64■□□□□ 0.41
Pkp1P97350 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pkp1P97350 Mir5126-201ENSMUST00000175513 77 ntBASIC17.64■□□□□ 0.41
Pkp1P97350 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
Pkp1P97350 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.64■□□□□ 0.41
Pkp1P97350 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pkp1P97350 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pkp1P97350 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pkp1P97350 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Gm27300-201ENSMUST00000184085 97 ntBASIC17.63■□□□□ 0.41
Pkp1P97350 Gm27335-201ENSMUST00000184758 97 ntBASIC17.63■□□□□ 0.41
Pkp1P97350 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pkp1P97350 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pkp1P97350 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkp1P97350 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.62■□□□□ 0.41
Pkp1P97350 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Gm13597-201ENSMUST00000121239 375 ntBASIC17.62■□□□□ 0.41
Pkp1P97350 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.62■□□□□ 0.41
Pkp1P97350 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.62■□□□□ 0.41
Pkp1P97350 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.62■□□□□ 0.41
Pkp1P97350 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pkp1P97350 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.62■□□□□ 0.41
Pkp1P97350 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pkp1P97350 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pkp1P97350 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms