Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm13464-201ENSMUST00000119418 935 ntBASIC18.88■□□□□ 0.61
Nkx2-3P97334 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm11424-201ENSMUST00000121929 829 ntBASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm43703-201ENSMUST00000200523 763 ntBASIC18.88■□□□□ 0.61
Nkx2-3P97334 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.88■□□□□ 0.61
Nkx2-3P97334 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.88■□□□□ 0.61
Nkx2-3P97334 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-3P97334 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm24543-201ENSMUST00000103867 82 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm29667-201ENSMUST00000190817 490 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 BC037039-201ENSMUST00000192003 2205 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm2451-201ENSMUST00000199447 999 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm10290-201ENSMUST00000200451 999 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.87■□□□□ 0.61
Nkx2-3P97334 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx2-3P97334 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm29310-201ENSMUST00000185468 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21825-201ENSMUST00000185728 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm29109-201ENSMUST00000185895 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21896-201ENSMUST00000186520 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21873-201ENSMUST00000186728 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21794-201ENSMUST00000187056 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21880-201ENSMUST00000187275 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21826-201ENSMUST00000187451 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21198-201ENSMUST00000188393 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21749-201ENSMUST00000189343 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21901-201ENSMUST00000189568 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm29424-201ENSMUST00000189716 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm28599-201ENSMUST00000189838 694 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21867-201ENSMUST00000189917 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm29269-201ENSMUST00000190087 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21722-201ENSMUST00000190153 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm28423-201ENSMUST00000190701 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21899-201ENSMUST00000190745 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21910-201ENSMUST00000191163 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21849-201ENSMUST00000191571 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm28678-201ENSMUST00000191593 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm20910-201ENSMUST00000193268 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm21871-201ENSMUST00000194621 696 ntBASIC18.86■□□□□ 0.61
Nkx2-3P97334 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms