Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.55■□□□□ 0.08
Trim43bP86448 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim43bP86448 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Gm18733-201ENSMUST00000173950 856 ntBASIC15.55■□□□□ 0.08
Trim43bP86448 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim43bP86448 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim43bP86448 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43bP86448 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43bP86448 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43bP86448 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43bP86448 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43bP86448 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.54■□□□□ 0.08
Trim43bP86448 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43bP86448 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Gm25745-201ENSMUST00000174945 133 ntBASIC15.54■□□□□ 0.08
Trim43bP86448 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Gm6376-201ENSMUST00000209407 580 ntBASIC15.54■□□□□ 0.08
Trim43bP86448 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.54■□□□□ 0.08
Trim43bP86448 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.54■□□□□ 0.08
Trim43bP86448 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43bP86448 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Trim43bP86448 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trim43bP86448 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43bP86448 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.53■□□□□ 0.08
Trim43bP86448 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Gm12497-201ENSMUST00000138778 237 ntBASIC15.53■□□□□ 0.08
Trim43bP86448 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trim43bP86448 Gm44771-201ENSMUST00000206975 626 ntBASIC15.53■□□□□ 0.08
Trim43bP86448 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.53■□□□□ 0.08
Trim43bP86448 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.53■□□□□ 0.08
Trim43bP86448 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim43bP86448 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim43bP86448 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim43bP86448 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43bP86448 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43bP86448 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim43bP86448 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43bP86448 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43bP86448 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim43bP86448 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms