Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SgcaP82350 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SgcaP82350 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.69□□□□□ -0.38
SgcaP82350 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.69□□□□□ -0.38
SgcaP82350 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SgcaP82350 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcaP82350 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SgcaP82350 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SgcaP82350 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SgcaP82350 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SgcaP82350 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Mir5122-201ENSMUST00000175004 89 ntBASIC12.68□□□□□ -0.38
SgcaP82350 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Gm27011-201ENSMUST00000182352 972 ntBASIC12.68□□□□□ -0.38
SgcaP82350 Gm44430-201ENSMUST00000203376 995 ntBASIC12.68□□□□□ -0.38
SgcaP82350 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Gm7367-201ENSMUST00000057611 492 ntBASIC12.68□□□□□ -0.38
SgcaP82350 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.68□□□□□ -0.38
SgcaP82350 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcaP82350 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcaP82350 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms