Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.95□□□□□ -0.02
Shox2P70390 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.95□□□□□ -0.02
Shox2P70390 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.95□□□□□ -0.02
Shox2P70390 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.95□□□□□ -0.02
Shox2P70390 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.95□□□□□ -0.02
Shox2P70390 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.95□□□□□ -0.02
Shox2P70390 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shox2P70390 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.94□□□□□ -0.02
Shox2P70390 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Shox2P70390 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Shox2P70390 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.94□□□□□ -0.02
Shox2P70390 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Shox2P70390 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.94□□□□□ -0.02
Shox2P70390 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.94□□□□□ -0.02
Shox2P70390 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.94□□□□□ -0.02
Shox2P70390 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.94□□□□□ -0.02
Shox2P70390 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Shox2P70390 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shox2P70390 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.93□□□□□ -0.02
Shox2P70390 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.93□□□□□ -0.02
Shox2P70390 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Shox2P70390 Gm25406-201ENSMUST00000157599 105 ntBASIC14.93□□□□□ -0.02
Shox2P70390 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Shox2P70390 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.93□□□□□ -0.02
Shox2P70390 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.93□□□□□ -0.02
Shox2P70390 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.93□□□□□ -0.02
Shox2P70390 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.93□□□□□ -0.02
Shox2P70390 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.93□□□□□ -0.02
Shox2P70390 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Shox2P70390 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Shox2P70390 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shox2P70390 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Shox2P70390 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Shox2P70390 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.92□□□□□ -0.02
Shox2P70390 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.92□□□□□ -0.02
Shox2P70390 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shox2P70390 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shox2P70390 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.92□□□□□ -0.02
Shox2P70390 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.92□□□□□ -0.02
Shox2P70390 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.92□□□□□ -0.02
Shox2P70390 Gm9987-201ENSMUST00000069768 567 ntBASIC14.92□□□□□ -0.02
Shox2P70390 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.92□□□□□ -0.02
Shox2P70390 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shox2P70390 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.91□□□□□ -0.02
Shox2P70390 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms