Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mir5126-201ENSMUST00000175513 77 ntBASIC12.59□□□□□ -0.39
Pdlim4P70271 Gm7787-201ENSMUST00000216858 688 ntBASIC12.59□□□□□ -0.39
Pdlim4P70271 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.59□□□□□ -0.39
Pdlim4P70271 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim4P70271 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.59□□□□□ -0.39
Pdlim4P70271 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim4P70271 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim4P70271 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.58□□□□□ -0.39
Pdlim4P70271 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim4P70271 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim4P70271 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim4P70271 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.58□□□□□ -0.4
Pdlim4P70271 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.58□□□□□ -0.4
Pdlim4P70271 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim4P70271 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.58□□□□□ -0.4
Pdlim4P70271 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.58□□□□□ -0.4
Pdlim4P70271 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim4P70271 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Gm18489-201ENSMUST00000172565 551 ntBASIC12.57□□□□□ -0.4
Pdlim4P70271 Gm5682-201ENSMUST00000173402 505 ntBASIC12.57□□□□□ -0.4
Pdlim4P70271 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.57□□□□□ -0.4
Pdlim4P70271 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.57□□□□□ -0.4
Pdlim4P70271 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdlim4P70271 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim4P70271 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms