Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.63■□□□□ 0.25
Hmgb1P63158 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmgb1P63158 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.63■□□□□ 0.25
Hmgb1P63158 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.63■□□□□ 0.25
Hmgb1P63158 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
Hmgb1P63158 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgb1P63158 Rubie-203ENSMUST00000227803 2430 ntBASIC16.62■□□□□ 0.25
Hmgb1P63158 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.62■□□□□ 0.25
Hmgb1P63158 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Gm7977-201ENSMUST00000193787 748 ntBASIC16.62■□□□□ 0.25
Hmgb1P63158 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.62■□□□□ 0.25
Hmgb1P63158 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hmgb1P63158 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgb1P63158 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.62■□□□□ 0.25
Hmgb1P63158 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.61■□□□□ 0.25
Hmgb1P63158 Ank2-226ENSMUST00000189368 339 ntBASIC16.61■□□□□ 0.25
Hmgb1P63158 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.61■□□□□ 0.25
Hmgb1P63158 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgb1P63158 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hmgb1P63158 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.6■□□□□ 0.25
Hmgb1P63158 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.6■□□□□ 0.25
Hmgb1P63158 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.6■□□□□ 0.25
Hmgb1P63158 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.6■□□□□ 0.25
Hmgb1P63158 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Gm25927-201ENSMUST00000175058 117 ntBASIC16.6■□□□□ 0.25
Hmgb1P63158 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.6■□□□□ 0.25
Hmgb1P63158 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms