Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rps28P62858 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC8.91□□□□□ -0.98
Rps28P62858 Gm19817-201ENSMUST00000199764 2132 ntBASIC8.91□□□□□ -0.98
Rps28P62858 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rps28P62858 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rps28P62858 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rps28P62858 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Rps28P62858 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC8.9□□□□□ -0.98
Rps28P62858 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 CT009713.10-201ENSMUST00000225013 1986 ntBASIC8.9□□□□□ -0.98
Rps28P62858 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rps28P62858 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.9□□□□□ -0.98
Rps28P62858 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rps28P62858 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC8.9□□□□□ -0.98
Rps28P62858 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rps28P62858 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC8.9□□□□□ -0.98
Rps28P62858 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC8.9□□□□□ -0.99
Rps28P62858 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Rps28P62858 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rps28P62858 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Rps28P62858 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC8.89□□□□□ -0.99
Rps28P62858 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Rbfox2-206ENSMUST00000227314 1810 ntBASIC8.89□□□□□ -0.99
Rps28P62858 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rps28P62858 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms