Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm12933-201ENSMUST00000120203 872 ntBASIC13.83□□□□□ -0.2
Lsm3P62311 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lsm3P62311 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.83□□□□□ -0.2
Lsm3P62311 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lsm3P62311 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lsm3P62311 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm3P62311 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm3P62311 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm3P62311 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Gm6257-201ENSMUST00000163864 910 ntBASIC13.82□□□□□ -0.2
Lsm3P62311 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.82□□□□□ -0.2
Lsm3P62311 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.82□□□□□ -0.2
Lsm3P62311 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
Lsm3P62311 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Lsm3P62311 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.82□□□□□ -0.2
Lsm3P62311 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.82□□□□□ -0.2
Lsm3P62311 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm3P62311 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm3P62311 Carlr-201ENSMUST00000181515 2574 ntBASIC13.81□□□□□ -0.2
Lsm3P62311 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm3P62311 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Gm15378-201ENSMUST00000121894 207 ntBASIC13.81□□□□□ -0.2
Lsm3P62311 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm3P62311 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.81□□□□□ -0.2
Lsm3P62311 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm3P62311 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.81□□□□□ -0.2
Lsm3P62311 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lsm3P62311 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.81□□□□□ -0.2
Lsm3P62311 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm3P62311 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm3P62311 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm3P62311 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm3P62311 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms