Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp25P57080 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Usp25P57080 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp25P57080 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Usp25P57080 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Gm23547-201ENSMUST00000158210 271 ntBASIC17.13■□□□□ 0.33
Usp25P57080 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Gm6345-202ENSMUST00000180900 204 ntBASIC17.13■□□□□ 0.33
Usp25P57080 Gm17808-201ENSMUST00000200859 894 ntBASIC17.13■□□□□ 0.33
Usp25P57080 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Usp25P57080 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp25P57080 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Usp25P57080 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp25P57080 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Gm29518-201ENSMUST00000190858 372 ntBASIC17.12■□□□□ 0.33
Usp25P57080 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.12■□□□□ 0.33
Usp25P57080 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp25P57080 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Usp25P57080 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.12■□□□□ 0.33
Usp25P57080 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp25P57080 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp25P57080 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp25P57080 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp25P57080 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Usp25P57080 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp25P57080 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp25P57080 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp25P57080 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Usp25P57080 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp25P57080 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Usp25P57080 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp25P57080 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp25P57080 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp25P57080 Gm13312-201ENSMUST00000119631 718 ntBASIC17.1■□□□□ 0.33
Usp25P57080 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.1■□□□□ 0.33
Usp25P57080 Gm19164-201ENSMUST00000210667 640 ntBASIC17.1■□□□□ 0.33
Usp25P57080 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp25P57080 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms