Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.49□□□□□ -0.09
Cdkn2bP55271 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.49□□□□□ -0.09
Cdkn2bP55271 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Gm27704-201ENSMUST00000185094 107 ntBASIC14.48□□□□□ -0.09
Cdkn2bP55271 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.48□□□□□ -0.09
Cdkn2bP55271 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn2bP55271 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gm12008-201ENSMUST00000117791 755 ntBASIC14.47□□□□□ -0.09
Cdkn2bP55271 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gm27357-201ENSMUST00000183754 135 ntBASIC14.47□□□□□ -0.09
Cdkn2bP55271 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.47□□□□□ -0.09
Cdkn2bP55271 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkn2bP55271 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms