Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Abcd3P55096 Gm11764-201ENSMUST00000120221 623 ntBASIC13.53□□□□□ -0.24
Abcd3P55096 Gm7862-201ENSMUST00000121461 292 ntBASIC13.53□□□□□ -0.24
Abcd3P55096 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Abcd3P55096 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.53□□□□□ -0.24
Abcd3P55096 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.53□□□□□ -0.24
Abcd3P55096 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.53□□□□□ -0.24
Abcd3P55096 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Abcd3P55096 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Abcd3P55096 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.53□□□□□ -0.24
Abcd3P55096 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Abcd3P55096 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd3P55096 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Abcd3P55096 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd3P55096 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Mir8098-201ENSMUST00000184011 137 ntBASIC13.52□□□□□ -0.25
Abcd3P55096 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Abcd3P55096 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.52□□□□□ -0.25
Abcd3P55096 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd3P55096 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Abcd3P55096 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Abcd3P55096 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.51□□□□□ -0.25
Abcd3P55096 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.51□□□□□ -0.25
Abcd3P55096 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Abcd3P55096 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Abcd3P55096 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Gm11452-201ENSMUST00000122376 690 ntBASIC13.51□□□□□ -0.25
Abcd3P55096 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.51□□□□□ -0.25
Abcd3P55096 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.51□□□□□ -0.25
Abcd3P55096 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.51□□□□□ -0.25
Abcd3P55096 Gm7787-201ENSMUST00000216858 688 ntBASIC13.51□□□□□ -0.25
Abcd3P55096 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
Abcd3P55096 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd3P55096 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Abcd3P55096 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.5□□□□□ -0.25
Abcd3P55096 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.5□□□□□ -0.25
Abcd3P55096 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.5□□□□□ -0.25
Abcd3P55096 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abcd3P55096 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms