Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 AW822252-206ENSMUST00000208904 237 ntBASIC14.95□□□□□ -0.02
Pdx1P52946 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.95□□□□□ -0.02
Pdx1P52946 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pdx1P52946 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdx1P52946 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pdx1P52946 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdx1P52946 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.94□□□□□ -0.02
Pdx1P52946 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdx1P52946 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.94□□□□□ -0.02
Pdx1P52946 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pdx1P52946 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Pdx1P52946 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdx1P52946 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdx1P52946 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pdx1P52946 Gm18206-201ENSMUST00000207027 926 ntBASIC14.93□□□□□ -0.02
Pdx1P52946 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdx1P52946 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdx1P52946 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdx1P52946 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pdx1P52946 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pdx1P52946 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pdx1P52946 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdx1P52946 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pdx1P52946 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.92□□□□□ -0.02
Pdx1P52946 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pdx1P52946 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.92□□□□□ -0.02
Pdx1P52946 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.92□□□□□ -0.02
Pdx1P52946 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pdx1P52946 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pdx1P52946 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdx1P52946 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms