Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.48□□□□□ -0.09
Sox18P43680 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Sox18P43680 Gm15487-201ENSMUST00000122373 465 ntBASIC14.48□□□□□ -0.09
Sox18P43680 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
Sox18P43680 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.48□□□□□ -0.09
Sox18P43680 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox18P43680 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.48□□□□□ -0.09
Sox18P43680 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox18P43680 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.48□□□□□ -0.09
Sox18P43680 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox18P43680 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox18P43680 Gm14928-201ENSMUST00000120198 477 ntBASIC14.47□□□□□ -0.09
Sox18P43680 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.47□□□□□ -0.09
Sox18P43680 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.47□□□□□ -0.09
Sox18P43680 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sox18P43680 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox18P43680 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.46□□□□□ -0.09
Sox18P43680 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox18P43680 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox18P43680 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Gm14767-201ENSMUST00000121559 586 ntBASIC14.46□□□□□ -0.09
Sox18P43680 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.46□□□□□ -0.09
Sox18P43680 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.46□□□□□ -0.09
Sox18P43680 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Gm6546-201ENSMUST00000192096 766 ntBASIC14.46□□□□□ -0.09
Sox18P43680 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Gm9063-201ENSMUST00000223299 582 ntBASIC14.46□□□□□ -0.09
Sox18P43680 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox18P43680 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.46□□□□□ -0.1
Sox18P43680 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.46□□□□□ -0.1
Sox18P43680 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Sox18P43680 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox18P43680 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sox18P43680 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox18P43680 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox18P43680 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox18P43680 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.45□□□□□ -0.1
Sox18P43680 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Sox18P43680 Gm27838-201ENSMUST00000184829 128 ntBASIC14.45□□□□□ -0.1
Sox18P43680 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Grk6-207ENSMUST00000225925 2769 ntBASIC14.45□□□□□ -0.1
Sox18P43680 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox18P43680 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox18P43680 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms