Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.85□□□□□ -0.19
Nkx2-2P42586 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.85□□□□□ -0.19
Nkx2-2P42586 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.85□□□□□ -0.19
Nkx2-2P42586 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-2P42586 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.84□□□□□ -0.19
Nkx2-2P42586 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-2P42586 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-2P42586 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-2P42586 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Gm12008-201ENSMUST00000117791 755 ntBASIC13.83□□□□□ -0.2
Nkx2-2P42586 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms